Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nop56Q9D6Z1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nop56Q9D6Z1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nop56Q9D6Z1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Gm5921-201ENSMUST00000075898 882 ntBASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nop56Q9D6Z1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Nop56Q9D6Z1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nop56Q9D6Z1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nop56Q9D6Z1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nop56Q9D6Z1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nop56Q9D6Z1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nop56Q9D6Z1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nop56Q9D6Z1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nop56Q9D6Z1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms