Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mrps28Q9CY16 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Mrps28Q9CY16 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Gm11421-201ENSMUST00000122124 294 ntBASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Smad6-203ENSMUST00000179458 273 ntBASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Serp2-204ENSMUST00000228055 705 ntBASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Mrps28Q9CY16 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.44■□□□□ 0.38
Mrps28Q9CY16 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Mrps28Q9CY16 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrps28Q9CY16 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Gm26833-201ENSMUST00000180899 440 ntBASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Gm43017-201ENSMUST00000198296 752 ntBASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrps28Q9CY16 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Mrps28Q9CY16 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrps28Q9CY16 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms