Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Gm13238-201ENSMUST00000117655 780 ntBASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd1lQ9CXF7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
Chd1lQ9CXF7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Chd1lQ9CXF7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd1lQ9CXF7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd1lQ9CXF7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chd1lQ9CXF7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chd1lQ9CXF7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chd1lQ9CXF7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chd1lQ9CXF7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.87■■□□□ 1.09
Chd1lQ9CXF7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chd1lQ9CXF7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chd1lQ9CXF7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd1lQ9CXF7 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chd1lQ9CXF7 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.83■■□□□ 1.09
Chd1lQ9CXF7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chd1lQ9CXF7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.83■■□□□ 1.08
Chd1lQ9CXF7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chd1lQ9CXF7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms