Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf135Q9CWS1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf135Q9CWS1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf135Q9CWS1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.08■□□□□ 0.81
Rnf135Q9CWS1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf135Q9CWS1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf135Q9CWS1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf135Q9CWS1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf135Q9CWS1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf135Q9CWS1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf135Q9CWS1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.06■□□□□ 0.8
Rnf135Q9CWS1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf135Q9CWS1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf135Q9CWS1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf135Q9CWS1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Gm8495-201ENSMUST00000188740 694 ntBASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf135Q9CWS1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf135Q9CWS1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms