Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Trmt13-210ENSMUST00000198454 880 ntBASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cstf1Q99LC2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Gm6211-202ENSMUST00000167849 925 ntBASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cstf1Q99LC2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cstf1Q99LC2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cstf1Q99LC2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cstf1Q99LC2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf1Q99LC2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.31■□□□□ 0.68
Cstf1Q99LC2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf1Q99LC2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf1Q99LC2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf1Q99LC2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.29■□□□□ 0.68
Cstf1Q99LC2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf1Q99LC2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.28■□□□□ 0.68
Cstf1Q99LC2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.28■□□□□ 0.68
Cstf1Q99LC2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf1Q99LC2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf1Q99LC2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf1Q99LC2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms