Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Gm6211-202ENSMUST00000167849 925 ntBASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Gm22240-201ENSMUST00000175225 82 ntBASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.7■□□□□ 0.74
Smarcd2Q99JR8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd2Q99JR8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd2Q99JR8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd2Q99JR8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd2Q99JR8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smarcd2Q99JR8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd2Q99JR8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Gm8520-201ENSMUST00000186517 868 ntBASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd2Q99JR8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd2Q99JR8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.65■□□□□ 0.74
Smarcd2Q99JR8 Gm7860-201ENSMUST00000121190 879 ntBASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Gm20049-201ENSMUST00000219950 730 ntBASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd2Q99JR8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcd2Q99JR8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd2Q99JR8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smarcd2Q99JR8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd2Q99JR8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smarcd2Q99JR8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd2Q99JR8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd2Q99JR8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd2Q99JR8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Smarcd2Q99JR8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms