Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Homer3Q99JP6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Homer3Q99JP6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.22■□□□□ 0.67
Homer3Q99JP6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Homer3Q99JP6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.21■□□□□ 0.67
Homer3Q99JP6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Homer3Q99JP6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.2■□□□□ 0.66
Homer3Q99JP6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Homer3Q99JP6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Homer3Q99JP6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.18■□□□□ 0.66
Homer3Q99JP6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Homer3Q99JP6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Homer3Q99JP6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms