Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha3Q91Y16 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Pcdha3Q91Y16 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha3Q91Y16 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Smad6-203ENSMUST00000179458 273 ntBASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Pcdha3Q91Y16 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha3Q91Y16 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdha3Q91Y16 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdha3Q91Y16 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha3Q91Y16 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Pcdha3Q91Y16 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha3Q91Y16 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Gm11421-201ENSMUST00000122124 294 ntBASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha3Q91Y16 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha3Q91Y16 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Gm43060-201ENSMUST00000200621 289 ntBASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha3Q91Y16 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha3Q91Y16 AA386476-201ENSMUST00000098781 1665 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms