Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha9Q91Y11 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha9Q91Y11 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Pcdha9Q91Y11 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha9Q91Y11 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdha9Q91Y11 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha9Q91Y11 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdha9Q91Y11 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdha9Q91Y11 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha9Q91Y11 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha9Q91Y11 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha9Q91Y11 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha9Q91Y11 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Pcdha9Q91Y11 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdha9Q91Y11 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha9Q91Y11 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Notumos-201ENSMUST00000151998 2659 ntBASIC20.61■□□□□ 0.89
Pcdha9Q91Y11 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha9Q91Y11 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha9Q91Y11 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha9Q91Y11 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha9Q91Y11 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha9Q91Y11 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdha9Q91Y11 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha9Q91Y11 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha9Q91Y11 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha9Q91Y11 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
Pcdha9Q91Y11 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.57■□□□□ 0.88
Pcdha9Q91Y11 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha9Q91Y11 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms