Protein–RNA interactions for Protein: Q91Y03

Pcdhb16, MCG141291, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb16Q91Y03 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb16Q91Y03 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb16Q91Y03 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb16Q91Y03 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Pcdhb16Q91Y03 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Gm12251-201ENSMUST00000117893 792 ntBASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb16Q91Y03 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Gm6139-201ENSMUST00000079261 882 ntBASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb16Q91Y03 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb16Q91Y03 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb16Q91Y03 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb16Q91Y03 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb16Q91Y03 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb16Q91Y03 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb16Q91Y03 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb16Q91Y03 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb16Q91Y03 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb16Q91Y03 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb16Q91Y03 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb16Q91Y03 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb16Q91Y03 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms