Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb20Q91XZ9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Gm44711-201ENSMUST00000205414 1264 ntBASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb20Q91XZ9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb20Q91XZ9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb20Q91XZ9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb20Q91XZ9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb20Q91XZ9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb20Q91XZ9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb20Q91XZ9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb20Q91XZ9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms