Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb22Q91XZ8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb22Q91XZ8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb22Q91XZ8 Notumos-201ENSMUST00000151998 2659 ntBASIC22.68■■□□□ 1.22
Pcdhb22Q91XZ8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb22Q91XZ8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb22Q91XZ8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb22Q91XZ8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb22Q91XZ8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb22Q91XZ8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb22Q91XZ8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Pcdhb22Q91XZ8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb22Q91XZ8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb22Q91XZ8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhb22Q91XZ8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Pcdhb22Q91XZ8 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.64■■□□□ 1.21
Pcdhb22Q91XZ8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Pcdhb22Q91XZ8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb22Q91XZ8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.64■■□□□ 1.21
Pcdhb22Q91XZ8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb22Q91XZ8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb22Q91XZ8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb22Q91XZ8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb22Q91XZ8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb22Q91XZ8 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.63■■□□□ 1.21
Pcdhb22Q91XZ8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb22Q91XZ8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb22Q91XZ8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb22Q91XZ8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pcdhb22Q91XZ8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Pcdhb22Q91XZ8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms