Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb6Q91XZ4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb6Q91XZ4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.92■□□□□ 0.78
Pcdhb6Q91XZ4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhb6Q91XZ4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb6Q91XZ4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdhb6Q91XZ4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Gm11421-201ENSMUST00000122124 294 ntBASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb6Q91XZ4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhb6Q91XZ4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb6Q91XZ4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms