Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga9Q91XX9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga9Q91XX9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhga9Q91XX9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Pcdhga9Q91XX9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga9Q91XX9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga9Q91XX9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.14■□□□□ 0.65
Pcdhga9Q91XX9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga9Q91XX9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga9Q91XX9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhga9Q91XX9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga9Q91XX9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga9Q91XX9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhga9Q91XX9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhga9Q91XX9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhga9Q91XX9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga9Q91XX9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga9Q91XX9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhga9Q91XX9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga9Q91XX9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga9Q91XX9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhga9Q91XX9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga9Q91XX9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga9Q91XX9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhga9Q91XX9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhga9Q91XX9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms