Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhgc3Q91XX1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgc3Q91XX1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgc3Q91XX1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgc3Q91XX1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgc3Q91XX1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhgc3Q91XX1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgc3Q91XX1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgc3Q91XX1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms