Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.33■■□□□ 1.17
Trex1Q91XB0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.33■■□□□ 1.17
Trex1Q91XB0 Gm4968-201ENSMUST00000071458 858 ntBASIC22.33■■□□□ 1.17
Trex1Q91XB0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trex1Q91XB0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trex1Q91XB0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.32■■□□□ 1.16
Trex1Q91XB0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trex1Q91XB0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trex1Q91XB0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trex1Q91XB0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trex1Q91XB0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Gm7290-201ENSMUST00000104990 617 ntBASIC22.29■■□□□ 1.16
Trex1Q91XB0 Gm12918-201ENSMUST00000120234 636 ntBASIC22.29■■□□□ 1.16
Trex1Q91XB0 Gm15710-201ENSMUST00000121821 636 ntBASIC22.29■■□□□ 1.16
Trex1Q91XB0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Gm5075-201ENSMUST00000196916 622 ntBASIC22.29■■□□□ 1.16
Trex1Q91XB0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.29■■□□□ 1.16
Trex1Q91XB0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.29■■□□□ 1.16
Trex1Q91XB0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Trex1Q91XB0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trex1Q91XB0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Gm7860-201ENSMUST00000121190 879 ntBASIC22.28■■□□□ 1.16
Trex1Q91XB0 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.28■■□□□ 1.16
Trex1Q91XB0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
Trex1Q91XB0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trex1Q91XB0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trex1Q91XB0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
Trex1Q91XB0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Trex1Q91XB0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Gm10653-202ENSMUST00000139570 835 ntBASIC22.26■■□□□ 1.15
Trex1Q91XB0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trex1Q91XB0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trex1Q91XB0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.25■■□□□ 1.15
Trex1Q91XB0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.25■■□□□ 1.15
Trex1Q91XB0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trex1Q91XB0 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.24■■□□□ 1.15
Trex1Q91XB0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms