Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.68■□□□□ 0.9
TraipQ8VIG6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TraipQ8VIG6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.67■□□□□ 0.9
TraipQ8VIG6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.67■□□□□ 0.9
TraipQ8VIG6 Gm7290-201ENSMUST00000104990 617 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Gm12918-201ENSMUST00000120234 636 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Gm7860-201ENSMUST00000121190 879 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Gm15710-201ENSMUST00000121821 636 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Gm5075-201ENSMUST00000196916 622 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.66■□□□□ 0.9
TraipQ8VIG6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TraipQ8VIG6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TraipQ8VIG6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TraipQ8VIG6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TraipQ8VIG6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TraipQ8VIG6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TraipQ8VIG6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.63■□□□□ 0.89
TraipQ8VIG6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.63■□□□□ 0.89
TraipQ8VIG6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TraipQ8VIG6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TraipQ8VIG6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TraipQ8VIG6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.62■□□□□ 0.89
TraipQ8VIG6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TraipQ8VIG6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TraipQ8VIG6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TraipQ8VIG6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.61■□□□□ 0.89
TraipQ8VIG6 Mir5133-201ENSMUST00000174955 77 ntBASIC20.6■□□□□ 0.89
TraipQ8VIG6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TraipQ8VIG6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TraipQ8VIG6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TraipQ8VIG6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TraipQ8VIG6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TraipQ8VIG6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TraipQ8VIG6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TraipQ8VIG6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms