Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab40cQ8VHQ4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Gm5921-201ENSMUST00000075898 882 ntBASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab40cQ8VHQ4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab40cQ8VHQ4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab40cQ8VHQ4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rab40cQ8VHQ4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rab40cQ8VHQ4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rab40cQ8VHQ4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab40cQ8VHQ4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab40cQ8VHQ4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms