Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.7■□□□□ 0.58
Vps4aQ8VEJ9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4aQ8VEJ9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4aQ8VEJ9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4aQ8VEJ9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps4aQ8VEJ9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vps4aQ8VEJ9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps4aQ8VEJ9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps4aQ8VEJ9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4aQ8VEJ9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4aQ8VEJ9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.67■□□□□ 0.58
Vps4aQ8VEJ9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.67■□□□□ 0.58
Vps4aQ8VEJ9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps4aQ8VEJ9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps4aQ8VEJ9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps4aQ8VEJ9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps4aQ8VEJ9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps4aQ8VEJ9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps4aQ8VEJ9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms