Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Rcc1Q8VE37 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Rcc1Q8VE37 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rcc1Q8VE37 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rcc1Q8VE37 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rcc1Q8VE37 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rcc1Q8VE37 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Golgb1-201ENSMUST00000023534 498 ntBASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rcc1Q8VE37 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rcc1Q8VE37 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rcc1Q8VE37 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rcc1Q8VE37 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rcc1Q8VE37 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.58■□□□□ 0.24
Rcc1Q8VE37 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rcc1Q8VE37 AA386476-201ENSMUST00000098781 1665 ntBASIC16.58■□□□□ 0.24
Rcc1Q8VE37 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rcc1Q8VE37 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rcc1Q8VE37 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Rcc1Q8VE37 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rcc1Q8VE37 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rcc1Q8VE37 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rcc1Q8VE37 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rcc1Q8VE37 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms