Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dnajc28Q8VCE1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Gm13234-201ENSMUST00000120010 747 ntBASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Gm27011-201ENSMUST00000182352 972 ntBASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Gm27801-201ENSMUST00000184174 223 ntBASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Dnajc28Q8VCE1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Dnajc28Q8VCE1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Dnajc28Q8VCE1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Dnajc28Q8VCE1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Dnajc28Q8VCE1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Dnajc28Q8VCE1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Dnajc28Q8VCE1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Dnajc28Q8VCE1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Dnajc28Q8VCE1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Dnajc28Q8VCE1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Dnajc28Q8VCE1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Dnajc28Q8VCE1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Dnajc28Q8VCE1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Dnajc28Q8VCE1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Dnajc28Q8VCE1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21■□□□□ 0.95
Dnajc28Q8VCE1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Dnajc28Q8VCE1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms