Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf8Q8VC56 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf8Q8VC56 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf8Q8VC56 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf8Q8VC56 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf8Q8VC56 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf8Q8VC56 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf8Q8VC56 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.52■□□□□ 0.56
Rnf8Q8VC56 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf8Q8VC56 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf8Q8VC56 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf8Q8VC56 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf8Q8VC56 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf8Q8VC56 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf8Q8VC56 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms