Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps39Q8R5L3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Gm9847-201ENSMUST00000052528 599 ntBASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps39Q8R5L3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps39Q8R5L3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps39Q8R5L3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Vps39Q8R5L3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Vps39Q8R5L3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.33■□□□□ 0.68
Vps39Q8R5L3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.33■□□□□ 0.68
Vps39Q8R5L3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps39Q8R5L3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps39Q8R5L3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps39Q8R5L3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps39Q8R5L3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps39Q8R5L3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps39Q8R5L3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vps39Q8R5L3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vps39Q8R5L3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vps39Q8R5L3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vps39Q8R5L3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms