Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp33Q8R5K2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp33Q8R5K2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.31■■□□□ 1.16
Usp33Q8R5K2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp33Q8R5K2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp33Q8R5K2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Usp33Q8R5K2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp33Q8R5K2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Gm20049-201ENSMUST00000219950 730 ntBASIC22.29■■□□□ 1.16
Usp33Q8R5K2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Usp33Q8R5K2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Gm6211-202ENSMUST00000167849 925 ntBASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp33Q8R5K2 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.27■■□□□ 1.16
Usp33Q8R5K2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.27■■□□□ 1.16
Usp33Q8R5K2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Usp33Q8R5K2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Usp33Q8R5K2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp33Q8R5K2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Mir7071-201ENSMUST00000184847 69 ntBASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.25■■□□□ 1.15
Usp33Q8R5K2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp33Q8R5K2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Gm13534-201ENSMUST00000121169 513 ntBASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Gm10812-201ENSMUST00000099864 546 ntBASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Usp33Q8R5K2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Usp33Q8R5K2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms