Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Gm10849-201ENSMUST00000100397 618 ntBASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3kbp1Q8R550 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3kbp1Q8R550 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3kbp1Q8R550 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3kbp1Q8R550 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sh3kbp1Q8R550 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3kbp1Q8R550 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Gm11421-201ENSMUST00000122124 294 ntBASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
Sh3kbp1Q8R550 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sh3kbp1Q8R550 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sh3kbp1Q8R550 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms