Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cdt1Q8R4E9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdt1Q8R4E9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdt1Q8R4E9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdt1Q8R4E9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cdt1Q8R4E9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdt1Q8R4E9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdt1Q8R4E9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 AV356131-201ENSMUST00000206201 750 ntBASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cdt1Q8R4E9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms