Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slf1Q8R3P9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slf1Q8R3P9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slf1Q8R3P9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.52■□□□□ 0.71
Slf1Q8R3P9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slf1Q8R3P9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.52■□□□□ 0.71
Slf1Q8R3P9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slf1Q8R3P9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slf1Q8R3P9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slf1Q8R3P9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Slf1Q8R3P9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slf1Q8R3P9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Slf1Q8R3P9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Slf1Q8R3P9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms