Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Gm45417-201ENSMUST00000209533 758 ntBASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubqln1Q8R317 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.31■□□□□ 0.52
Ubqln1Q8R317 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Serp2-204ENSMUST00000228055 705 ntBASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Gm6139-201ENSMUST00000079261 882 ntBASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubqln1Q8R317 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ubqln1Q8R317 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Gm43173-201ENSMUST00000202246 593 ntBASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubqln1Q8R317 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubqln1Q8R317 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubqln1Q8R317 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ubqln1Q8R317 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.27■□□□□ 0.52
Ubqln1Q8R317 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubqln1Q8R317 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubqln1Q8R317 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ubqln1Q8R317 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Smad6-203ENSMUST00000179458 273 ntBASIC18.26■□□□□ 0.51
Ubqln1Q8R317 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubqln1Q8R317 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubqln1Q8R317 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms