Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vmn1r28Q8R2C9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vmn1r28Q8R2C9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vmn1r28Q8R2C9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vmn1r28Q8R2C9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Vmn1r28Q8R2C9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.77■□□□□ 0.44
Vmn1r28Q8R2C9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vmn1r28Q8R2C9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vmn1r28Q8R2C9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vmn1r28Q8R2C9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vmn1r28Q8R2C9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vmn1r28Q8R2C9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Gm27801-201ENSMUST00000184174 223 ntBASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vmn1r28Q8R2C9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms