Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zcchc9Q8R1J3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zcchc9Q8R1J3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Gm12933-201ENSMUST00000120203 872 ntBASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Gm27801-201ENSMUST00000184174 223 ntBASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
Zcchc9Q8R1J3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.27■□□□□ 0.68
Zcchc9Q8R1J3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zcchc9Q8R1J3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zcchc9Q8R1J3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zcchc9Q8R1J3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.27■□□□□ 0.68
Zcchc9Q8R1J3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zcchc9Q8R1J3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.27■□□□□ 0.67
Zcchc9Q8R1J3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zcchc9Q8R1J3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zcchc9Q8R1J3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zcchc9Q8R1J3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zcchc9Q8R1J3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zcchc9Q8R1J3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zcchc9Q8R1J3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Zcchc9Q8R1J3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms