Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sf3a1Q8K4Z5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Sf3a1Q8K4Z5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sf3a1Q8K4Z5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sf3a1Q8K4Z5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sf3a1Q8K4Z5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sf3a1Q8K4Z5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sf3a1Q8K4Z5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Sf3a1Q8K4Z5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sf3a1Q8K4Z5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sf3a1Q8K4Z5 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.69■■□□□ 1.38
Sf3a1Q8K4Z5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sf3a1Q8K4Z5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sf3a1Q8K4Z5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sf3a1Q8K4Z5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Sf3a1Q8K4Z5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sf3a1Q8K4Z5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sf3a1Q8K4Z5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sf3a1Q8K4Z5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sf3a1Q8K4Z5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sf3a1Q8K4Z5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sf3a1Q8K4Z5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sf3a1Q8K4Z5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sf3a1Q8K4Z5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Gm27801-201ENSMUST00000184174 223 ntBASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sf3a1Q8K4Z5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sf3a1Q8K4Z5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sf3a1Q8K4Z5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sf3a1Q8K4Z5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sf3a1Q8K4Z5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sf3a1Q8K4Z5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sf3a1Q8K4Z5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms