Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scara5Q8K299 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scara5Q8K299 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scara5Q8K299 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scara5Q8K299 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scara5Q8K299 Gm20049-201ENSMUST00000219950 730 ntBASIC19.4■□□□□ 0.7
Scara5Q8K299 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scara5Q8K299 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scara5Q8K299 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scara5Q8K299 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scara5Q8K299 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scara5Q8K299 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scara5Q8K299 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Scara5Q8K299 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scara5Q8K299 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scara5Q8K299 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scara5Q8K299 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.39■□□□□ 0.69
Scara5Q8K299 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.39■□□□□ 0.69
Scara5Q8K299 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.39■□□□□ 0.69
Scara5Q8K299 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scara5Q8K299 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scara5Q8K299 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scara5Q8K299 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Scara5Q8K299 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.38■□□□□ 0.69
Scara5Q8K299 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.38■□□□□ 0.69
Scara5Q8K299 Gm22325-201ENSMUST00000158904 308 ntBASIC19.38■□□□□ 0.69
Scara5Q8K299 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Scara5Q8K299 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scara5Q8K299 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.37■□□□□ 0.69
Scara5Q8K299 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Scara5Q8K299 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scara5Q8K299 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.37■□□□□ 0.69
Scara5Q8K299 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.36■□□□□ 0.69
Scara5Q8K299 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Mir7071-201ENSMUST00000184847 69 ntBASIC19.36■□□□□ 0.69
Scara5Q8K299 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.36■□□□□ 0.69
Scara5Q8K299 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scara5Q8K299 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.35■□□□□ 0.69
Scara5Q8K299 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.35■□□□□ 0.69
Scara5Q8K299 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.35■□□□□ 0.69
Scara5Q8K299 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scara5Q8K299 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.35■□□□□ 0.69
Scara5Q8K299 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Scara5Q8K299 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scara5Q8K299 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scara5Q8K299 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Scara5Q8K299 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scara5Q8K299 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scara5Q8K299 Gm6420-201ENSMUST00000193885 723 ntBASIC19.33■□□□□ 0.68
Scara5Q8K299 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.33■□□□□ 0.68
Scara5Q8K299 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms