Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim9Q8C7M3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim9Q8C7M3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim9Q8C7M3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim9Q8C7M3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim9Q8C7M3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim9Q8C7M3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim9Q8C7M3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Trim9Q8C7M3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim9Q8C7M3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim9Q8C7M3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim9Q8C7M3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim9Q8C7M3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim9Q8C7M3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trim9Q8C7M3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.36■■□□□ 1.01
Trim9Q8C7M3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Gm11421-201ENSMUST00000122124 294 ntBASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim9Q8C7M3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim9Q8C7M3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trim9Q8C7M3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim9Q8C7M3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim9Q8C7M3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms