Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Eri3Q8C460 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Eri3Q8C460 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Eri3Q8C460 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.42■□□□□ 0.54
Eri3Q8C460 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Eri3Q8C460 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Eri3Q8C460 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Eri3Q8C460 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
Eri3Q8C460 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Eri3Q8C460 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Eri3Q8C460 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Eri3Q8C460 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Eri3Q8C460 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Eri3Q8C460 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Eri3Q8C460 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Eri3Q8C460 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.4■□□□□ 0.54
Eri3Q8C460 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Eri3Q8C460 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Eri3Q8C460 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Eri3Q8C460 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Eri3Q8C460 Notumos-201ENSMUST00000151998 2659 ntBASIC18.39■□□□□ 0.54
Eri3Q8C460 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Eri3Q8C460 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Eri3Q8C460 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.39■□□□□ 0.53
Eri3Q8C460 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Eri3Q8C460 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.39■□□□□ 0.53
Eri3Q8C460 Gm40848-201ENSMUST00000221998 324 ntBASIC18.39■□□□□ 0.53
Eri3Q8C460 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Eri3Q8C460 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Eri3Q8C460 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Eri3Q8C460 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Eri3Q8C460 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Eri3Q8C460 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Eri3Q8C460 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Eri3Q8C460 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Eri3Q8C460 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Eri3Q8C460 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Eri3Q8C460 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Eri3Q8C460 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Eri3Q8C460 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Eri3Q8C460 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Eri3Q8C460 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Eri3Q8C460 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Eri3Q8C460 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.35■□□□□ 0.53
Eri3Q8C460 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.35■□□□□ 0.53
Eri3Q8C460 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Eri3Q8C460 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Eri3Q8C460 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Eri3Q8C460 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Eri3Q8C460 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.34■□□□□ 0.53
Eri3Q8C460 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.34■□□□□ 0.53
Eri3Q8C460 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Eri3Q8C460 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Eri3Q8C460 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.33■□□□□ 0.52
Eri3Q8C460 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.33■□□□□ 0.52
Eri3Q8C460 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.33■□□□□ 0.52
Eri3Q8C460 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Eri3Q8C460 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Eri3Q8C460 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms