Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Brat1Q8C3R1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Brat1Q8C3R1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Brat1Q8C3R1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Brat1Q8C3R1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brat1Q8C3R1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.45■□□□□ 0.86
Brat1Q8C3R1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.45■□□□□ 0.86
Brat1Q8C3R1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.45■□□□□ 0.86
Brat1Q8C3R1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brat1Q8C3R1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Brat1Q8C3R1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Brat1Q8C3R1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brat1Q8C3R1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Brat1Q8C3R1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brat1Q8C3R1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Brat1Q8C3R1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brat1Q8C3R1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brat1Q8C3R1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brat1Q8C3R1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.42■□□□□ 0.86
Brat1Q8C3R1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.42■□□□□ 0.86
Brat1Q8C3R1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Brat1Q8C3R1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brat1Q8C3R1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Brat1Q8C3R1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brat1Q8C3R1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brat1Q8C3R1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brat1Q8C3R1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Brat1Q8C3R1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brat1Q8C3R1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brat1Q8C3R1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brat1Q8C3R1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brat1Q8C3R1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Brat1Q8C3R1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.36■□□□□ 0.85
Brat1Q8C3R1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms