Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Ptcd1Q8C2E4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptcd1Q8C2E4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.95■■□□□ 1.42
Ptcd1Q8C2E4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ptcd1Q8C2E4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ptcd1Q8C2E4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ptcd1Q8C2E4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Gm20049-201ENSMUST00000219950 730 ntBASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Gm10812-201ENSMUST00000099864 546 ntBASIC23.94■■□□□ 1.42
Ptcd1Q8C2E4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptcd1Q8C2E4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ptcd1Q8C2E4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.92■■□□□ 1.42
Ptcd1Q8C2E4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.92■■□□□ 1.42
Ptcd1Q8C2E4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ptcd1Q8C2E4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.92■■□□□ 1.42
Ptcd1Q8C2E4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ptcd1Q8C2E4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptcd1Q8C2E4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptcd1Q8C2E4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Ptcd1Q8C2E4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Ptcd1Q8C2E4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ptcd1Q8C2E4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptcd1Q8C2E4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptcd1Q8C2E4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptcd1Q8C2E4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ptcd1Q8C2E4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Ptcd1Q8C2E4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ptcd1Q8C2E4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ptcd1Q8C2E4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Gm13146-201ENSMUST00000118508 780 ntBASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Mir6982-201ENSMUST00000184354 68 ntBASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ptcd1Q8C2E4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptcd1Q8C2E4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Gm37856-201ENSMUST00000191634 999 ntBASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms