Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim35Q8C006 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim35Q8C006 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trim35Q8C006 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim35Q8C006 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim35Q8C006 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim35Q8C006 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim35Q8C006 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim35Q8C006 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim35Q8C006 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim35Q8C006 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim35Q8C006 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim35Q8C006 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim35Q8C006 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim35Q8C006 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim35Q8C006 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim35Q8C006 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim35Q8C006 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim35Q8C006 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.63■□□□□ 0.73
Trim35Q8C006 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim35Q8C006 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim35Q8C006 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim35Q8C006 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim35Q8C006 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim35Q8C006 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim35Q8C006 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim35Q8C006 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim35Q8C006 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC19.61■□□□□ 0.73
Trim35Q8C006 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Gm43137-201ENSMUST00000198052 594 ntBASIC19.61■□□□□ 0.73
Trim35Q8C006 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim35Q8C006 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim35Q8C006 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim35Q8C006 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.6■□□□□ 0.73
Trim35Q8C006 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.6■□□□□ 0.73
Trim35Q8C006 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim35Q8C006 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim35Q8C006 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim35Q8C006 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim35Q8C006 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim35Q8C006 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim35Q8C006 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim35Q8C006 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim35Q8C006 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim35Q8C006 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim35Q8C006 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim35Q8C006 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim35Q8C006 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim35Q8C006 Gm22923-201ENSMUST00000174952 110 ntBASIC19.58■□□□□ 0.72
Trim35Q8C006 Gm10702-201ENSMUST00000098929 1268 ntBASIC19.58■□□□□ 0.72
Trim35Q8C006 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim35Q8C006 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Trim35Q8C006 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim35Q8C006 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim35Q8C006 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Trim35Q8C006 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms