Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup54Q8BTS4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.88■□□□□ 0.77
Nup54Q8BTS4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.88■□□□□ 0.77
Nup54Q8BTS4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.88■□□□□ 0.77
Nup54Q8BTS4 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nup54Q8BTS4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup54Q8BTS4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup54Q8BTS4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Gm9988-201ENSMUST00000069786 435 ntBASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nup54Q8BTS4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup54Q8BTS4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup54Q8BTS4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup54Q8BTS4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup54Q8BTS4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup54Q8BTS4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup54Q8BTS4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup54Q8BTS4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nup54Q8BTS4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nup54Q8BTS4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup54Q8BTS4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms