Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.28■■□□□ 1.16
Scfd1Q8BRF7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scfd1Q8BRF7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.27■■□□□ 1.15
Scfd1Q8BRF7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scfd1Q8BRF7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scfd1Q8BRF7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.26■■□□□ 1.15
Scfd1Q8BRF7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scfd1Q8BRF7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Scfd1Q8BRF7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Scfd1Q8BRF7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Scfd1Q8BRF7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scfd1Q8BRF7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scfd1Q8BRF7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Scfd1Q8BRF7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scfd1Q8BRF7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 Gm13534-201ENSMUST00000121169 513 ntBASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.23■■□□□ 1.15
Scfd1Q8BRF7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Gm7860-201ENSMUST00000121190 879 ntBASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scfd1Q8BRF7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scfd1Q8BRF7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scfd1Q8BRF7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Scfd1Q8BRF7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
Scfd1Q8BRF7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scfd1Q8BRF7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Scfd1Q8BRF7 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.2■■□□□ 1.15
Scfd1Q8BRF7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Scfd1Q8BRF7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scfd1Q8BRF7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
Scfd1Q8BRF7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Scfd1Q8BRF7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scfd1Q8BRF7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scfd1Q8BRF7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Scfd1Q8BRF7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scfd1Q8BRF7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scfd1Q8BRF7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Scfd1Q8BRF7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Mir5133-201ENSMUST00000174955 77 ntBASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Gm6420-201ENSMUST00000193885 723 ntBASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Scfd1Q8BRF7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms