Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.76■□□□□ 0.75
Suds3Q8BR65 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.76■□□□□ 0.75
Suds3Q8BR65 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Suds3Q8BR65 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.75■□□□□ 0.75
Suds3Q8BR65 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.75■□□□□ 0.75
Suds3Q8BR65 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Suds3Q8BR65 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Suds3Q8BR65 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Gm43017-201ENSMUST00000198296 752 ntBASIC19.73■□□□□ 0.75
Suds3Q8BR65 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Suds3Q8BR65 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Gm8493-201ENSMUST00000196881 489 ntBASIC19.72■□□□□ 0.75
Suds3Q8BR65 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Gm6139-201ENSMUST00000079261 882 ntBASIC19.72■□□□□ 0.75
Suds3Q8BR65 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.72■□□□□ 0.75
Suds3Q8BR65 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Suds3Q8BR65 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Suds3Q8BR65 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Suds3Q8BR65 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Suds3Q8BR65 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.7■□□□□ 0.74
Suds3Q8BR65 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.69■□□□□ 0.74
Suds3Q8BR65 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Suds3Q8BR65 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms