Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sfr1Q8BP27 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sfr1Q8BP27 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sfr1Q8BP27 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sfr1Q8BP27 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sfr1Q8BP27 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sfr1Q8BP27 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sfr1Q8BP27 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.59■□□□□ 0.73
Sfr1Q8BP27 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sfr1Q8BP27 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sfr1Q8BP27 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sfr1Q8BP27 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.58■□□□□ 0.73
Sfr1Q8BP27 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sfr1Q8BP27 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sfr1Q8BP27 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sfr1Q8BP27 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sfr1Q8BP27 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sfr1Q8BP27 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sfr1Q8BP27 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sfr1Q8BP27 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sfr1Q8BP27 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms