Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 Gm7977-201ENSMUST00000193787 748 ntBASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col16a1Q8BLX7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.89■■□□□ 1.74
Col16a1Q8BLX7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col16a1Q8BLX7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Col16a1Q8BLX7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col16a1Q8BLX7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Col16a1Q8BLX7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Col16a1Q8BLX7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col16a1Q8BLX7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Gm7860-201ENSMUST00000121190 879 ntBASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col16a1Q8BLX7 Mir6982-201ENSMUST00000184354 68 ntBASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Gm27275-201ENSMUST00000184318 272 ntBASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Rab3c-203ENSMUST00000224180 967 ntBASIC25.86■■□□□ 1.73
Col16a1Q8BLX7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Col16a1Q8BLX7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 Snhg20-203ENSMUST00000182811 2153 ntBASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col16a1Q8BLX7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Col16a1Q8BLX7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Col16a1Q8BLX7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Col16a1Q8BLX7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Col16a1Q8BLX7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Gm44672-201ENSMUST00000206944 1098 ntBASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 AC135963.1-201ENSMUST00000211640 717 ntBASIC25.82■■□□□ 1.72
Col16a1Q8BLX7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Col16a1Q8BLX7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col16a1Q8BLX7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col16a1Q8BLX7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col16a1Q8BLX7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col16a1Q8BLX7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Gm37563-201ENSMUST00000192580 1513 ntBASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Col16a1Q8BLX7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
Col16a1Q8BLX7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col16a1Q8BLX7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col16a1Q8BLX7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Col16a1Q8BLX7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Col16a1Q8BLX7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms