Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cpne4Q8BLR2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Gm27801-201ENSMUST00000184174 223 ntBASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cpne4Q8BLR2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cpne4Q8BLR2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cpne4Q8BLR2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
Cpne4Q8BLR2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cpne4Q8BLR2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne4Q8BLR2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne4Q8BLR2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne4Q8BLR2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.27■□□□□ 0.35
Cpne4Q8BLR2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne4Q8BLR2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne4Q8BLR2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne4Q8BLR2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne4Q8BLR2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms