Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr3Q8BL00 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdhr3Q8BL00 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Gm15546-201ENSMUST00000122095 826 ntBASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Gm22238-201ENSMUST00000175222 88 ntBASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdhr3Q8BL00 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdhr3Q8BL00 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdhr3Q8BL00 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Gm9959-201ENSMUST00000068277 390 ntBASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdhr3Q8BL00 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdhr3Q8BL00 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdhr3Q8BL00 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdhr3Q8BL00 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdhr3Q8BL00 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms