Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smg1Q8BKX6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smg1Q8BKX6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smg1Q8BKX6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smg1Q8BKX6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Gm9987-201ENSMUST00000069768 567 ntBASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smg1Q8BKX6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Gm27741-201ENSMUST00000185060 237 ntBASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smg1Q8BKX6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smg1Q8BKX6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smg1Q8BKX6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Smg1Q8BKX6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Smg1Q8BKX6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.58■□□□□ 0.25
Smg1Q8BKX6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smg1Q8BKX6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smg1Q8BKX6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smg1Q8BKX6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms