Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp2bQ8BJF9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chmp2bQ8BJF9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp2bQ8BJF9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp2bQ8BJF9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp2bQ8BJF9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp2bQ8BJF9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.68■□□□□ 0.74
Chmp2bQ8BJF9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2bQ8BJF9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2bQ8BJF9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Chmp2bQ8BJF9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
Chmp2bQ8BJF9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp2bQ8BJF9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.67■□□□□ 0.74
Chmp2bQ8BJF9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Chmp2bQ8BJF9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp2bQ8BJF9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms