Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim23Q8BGX0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim23Q8BGX0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Trim23Q8BGX0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim23Q8BGX0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Gm5874-201ENSMUST00000096101 508 ntBASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim23Q8BGX0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim23Q8BGX0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Trim23Q8BGX0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.66■□□□□ 0.58
Trim23Q8BGX0 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.66■□□□□ 0.58
Trim23Q8BGX0 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.66■□□□□ 0.58
Trim23Q8BGX0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim23Q8BGX0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim23Q8BGX0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim23Q8BGX0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim23Q8BGX0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms