Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam53bQ8BGR5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Fam53bQ8BGR5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam53bQ8BGR5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam53bQ8BGR5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam53bQ8BGR5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam53bQ8BGR5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fam53bQ8BGR5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Fam53bQ8BGR5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fam53bQ8BGR5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fam53bQ8BGR5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fam53bQ8BGR5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fam53bQ8BGR5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam53bQ8BGR5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Smad6-203ENSMUST00000179458 273 ntBASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam53bQ8BGR5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam53bQ8BGR5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.04■□□□□ 0.32
Fam53bQ8BGR5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Gm43017-201ENSMUST00000198296 752 ntBASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Fam53bQ8BGR5 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Fam53bQ8BGR5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam53bQ8BGR5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Fam53bQ8BGR5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Fam53bQ8BGR5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.02■□□□□ 0.31
Fam53bQ8BGR5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Fam53bQ8BGR5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms