Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nipal3Q8BGN5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.21■□□□□ 0.51
Nipal3Q8BGN5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nipal3Q8BGN5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
Nipal3Q8BGN5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Gm43017-201ENSMUST00000198296 752 ntBASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nipal3Q8BGN5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Gm43173-201ENSMUST00000202246 593 ntBASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nipal3Q8BGN5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Gm15039-201ENSMUST00000118914 875 ntBASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nipal3Q8BGN5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nipal3Q8BGN5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.14■□□□□ 0.5
Nipal3Q8BGN5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Nipal3Q8BGN5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nipal3Q8BGN5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nipal3Q8BGN5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nipal3Q8BGN5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nipal3Q8BGN5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Nipal3Q8BGN5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms