Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atg4bQ8BGE6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atg4bQ8BGE6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Gm11421-201ENSMUST00000122124 294 ntBASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atg4bQ8BGE6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.23■□□□□ 0.51
Atg4bQ8BGE6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Gm26833-201ENSMUST00000180899 440 ntBASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atg4bQ8BGE6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atg4bQ8BGE6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atg4bQ8BGE6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atg4bQ8BGE6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.21■□□□□ 0.51
Atg4bQ8BGE6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.21■□□□□ 0.51
Atg4bQ8BGE6 Gm40848-201ENSMUST00000221998 324 ntBASIC18.21■□□□□ 0.51
Atg4bQ8BGE6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atg4bQ8BGE6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atg4bQ8BGE6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atg4bQ8BGE6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.17■□□□□ 0.5
Atg4bQ8BGE6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.17■□□□□ 0.5
Atg4bQ8BGE6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms